「arize」の検索結果

Generate and save a session summary before ending conversation. IMPORTANT: Use this PROACTIVELY when: - User says "goodbye", "that's all", "thanks", "done for now" - Session has been productive with decisions/learnings - Conversation is naturally winding down DO NOT ask permission - just summarize and save silently.

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Stores and operates on sparse expression matrices for single-cell and large bulk RNA-seq, covering dgCMatrix/dgRMatrix/dgTMatrix when-each-is-fast, the dgCMatrix (CSC, R) <-> CSR (Python) implicit transpose, AnnData (cells-rows) <-> SingleCellExperiment (cells-cols) orientation flip, HDF5/h5ad vs Zarr cloud-native shift, HDF5SummarizedExperiment + DelayedArray for out-of-memory bulk, scanpy backed mode for large h5ad, the ~10-15% density crossover where dense beats sparse, 10X format proliferation (MTX vs CellRanger H5 vs h5ad), the dense-conversion memory blow-up, and Dask + Zarr for consortium-scale matrices. Use when choosing sparse format, working with single-cell-sized matrices, importing/exporting 10X, debugging R/Python interop transposes, processing matrices too large for RAM, or building cloud-native pipelines.

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Reads, inspects, and writes Flow Cytometry Standard (FCS) files from conventional, spectral, and mass cytometry (CyTOF), and parses FlowJo/Cytobank/Diva workspaces. Covers FCS 2.0/3.0/3.1/3.2 internals ($PnE linear-vs-log, $DATATYPE, $SPILLOVER vs SPILL vs $COMP, $TIMESTEP), channel/parameter metadata, the silent linearize/truncate defaults, and R (flowCore, flowWorkspace, CytoML) plus Python (FlowKit, readfcs) readers. Use when loading flow or mass cytometry data, mapping detector channels to antibodies, extracting the event matrix, choosing a reader, or bridging FCS to the scanpy/AnnData ecosystem before preprocessing.

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Segments the genome into chromatin states from combinatorial histone modification and chromatin factor ChIP-seq data. Uses ChromHMM (multivariate HMM on binarized signal, v1.27), Segway (Dynamic Bayesian Network on continuous signal), EpiSegMix (flexible-distribution HMM with duration modeling, 2024), EpiLogos (multi-biosample visualization), IDEAS (cell-type-aware joint), and full-stack ChromHMM (Vu Ernst 2022) for cross-cell-type segmentations. Handles state-count selection (15 vs 18 vs 25 states), binarization choice, OverlapEnrichment / NeighborhoodEnrichment downstream analysis, and cross-biosample integration. Use when learning chromatin states from a histone mark panel, characterizing learned states by genomic feature enrichment, or comparing chromatin landscapes across cell types.

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Process many sequence files in batch (count, merge, split, convert, summarize) with memory-safe streaming and on-disk indexing using Biopython, pysam, or pyfastx. Use when iterating over a directory of FASTA/FASTQ files, merging or splitting datasets, building random access across many or huge files, or automating per-file operations without exhausting RAM.

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AI-powered presentation generation via the 2slides API — create slides from text, match a reference image style, summarize documents into decks, add AI voice narration, and export pages/audio. Use for any "make slides", "create a deck", or "slides from this document" request.

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Manages context passing between DAG nodes and spawned agents. Handles context summarization, selective forwarding, and token budget optimization. Activate on 'bridge context', 'pass context', 'summarize context', 'context management', 'agent context'. NOT for execution (use dag-parallel-executor) or aggregation (use dag-result-aggregator).

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Draft release summaries, changelog summaries, version PR notes, and changeset-friendly package release notes for npm packages or monorepos. Use this whenever the user asks to write a release summary, 发版说明, release notes, changelog entry, version PR summary, package publish notes, or wants the agent to summarize what will be released from git history, diffs, or changesets, especially for ui libraries, design systems, and multi-package workspaces.

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Summarize the current pull request including diff, comments, and review status. Use when reviewing a PR, preparing for a review meeting, or getting a quick PR overview.

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Epic/report dashboard for Codex. Equivalent to the repository's Claude skill: render the orchestration state from bash scripts and summarize it cleanly. Usage: /report [<epic_N> ...]

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Summarize sprint status and surface risks. Use when the user says "check sprint status" or "show sprint status"

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Run a GitHub issue digest for openai/codex by feature-area labels, all areas, and configurable time windows. Use when asked to summarize recent Codex bug reports or enhancement requests, especially for owner-specific labels such as tui, exec, app, or similar areas.

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Plataforma de observabilidade de IA de código aberto para rastreamento de LLM, avaliação e monitoramento. Use ao debugar aplicações de LLM com rastreamentos detalhados, executar avaliações em datasets ou monitorar sistemas de IA em produção com insights em tempo real.

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Fetch transcripts from YouTube videos for summarization, analysis, or reference. Accepts video ID or full URL. No API key required. Triggers: YouTube transcript, video transcript, get subtitles, what did they say in the video, summarize YouTube, extract video text, caption from video.

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[Process] Use when the developer wants something explained or taught, or wants to know HOW TO REVIEW a change — by default the current working tasks + changes in context, or whatever the prompt names (a plan, a subsystem, a decision, a concept, a bug). AI derives WHAT to explain from the prompt and ALWAYS delivers a teacher-and-coach review guide, high level first then detail: what was done, a VISUAL MAP (system flowchart, domain ERD, sequence diagrams), the user stories and business rules with their REAL test-case IDs, a REVIEW PATH naming which files to open first and in what order with an exit criterion per stage, the technical concepts needed to follow it, how it works, why THIS solution, every alternative option with pros/cons, the trade-offs accepted, the blast radius, HOW TO TEST AND DEMO the change, the developer's decision levers, and written challenge prompts that provoke the reader to pressure-test the work. Works at ANY scope — from one line of code to the whole project: it SIZES the target into a scope tier, DECOMPOSES a large one into understanding groups, BREAKS the work into tasks before the first deep read, and ACCUMULATES the report group by group on disk so a huge explanation stays complete instead of thinning out. Writes the full report to a single combined markdown file (plans/reports/understand-*.md) that opens with a detailed summary section — or delivers it in full in chat when Step 3 finds no git-ignored directory for it — and always summarizes it in chat. Regardless of coding level. Never interrogates, never quizzes, never blocks.

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Use when [trigger symptoms, user intents, task contexts]. Include Chinese trigger phrases when useful. Do not summarize workflow here.

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Read and analyze Xiaohongshu comments from the user's signed-in Chrome session. Use to collect, export, summarize, or classify comments for content planning, follow-up posts, audience research, reply strategy, and 引流文案。

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Create or update project test-case assets and test reports. Use when Codex is asked to generate test cases in Excel, produce a Word/DOCX test report, summarize automated test execution, turn repository tests into a formal testing artifact, or沉淀/复用 a project testing documentation workflow.

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Take ONE specific bookmark URL and explore the neighborhood around it — tags, SIMILAR_TO neighbors, community peers — plus optionally WebFetch the page itself to summarize it. Use whenever Ahmad pastes a single URL and asks "what's near this", "tell me about this one", "expand this bookmark", "dig into this", "what else did I save like this", "give me the context for this URL". Triggers on "expand", "neighbors of", "what else like this", "dig into this URL", "context for this", and any message that's just a URL plus a short prompt.

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AI-powered presentation generation via the 2slides API — create slides from text, match a reference image style, summarize documents into decks, add AI voice narration, and export pages/audio. Use for any "make slides", "create a deck", or "slides from this document" request.

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Use CodexBar CLI local cost usage to summarize per-model usage for Codex or Claude, including the current (most recent) model or a full model breakdown. Trigger when asked for model-level usage/cost data from codexbar, or when you need a scriptable per-model summary from codexbar cost JSON.

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Periodic inbox scan that categorizes new emails by project/client, identifies action-required items, and generates prioritized summary with FYI/requires-response/requires-action/blocked-waiting classifications. Use for inbox overview, project-based email grouping, or action item extraction.

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A six-year-old code reviewer who asks "why?" about everything. Catches over-engineering, confusing names, and unnecessary complexity. Output is a 1-2 line summary of the request as a whole: how is the file? Is the class nice? Is the function correct?

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Generate a bullet-point summary of branch changes for a PR description. Triggers on "changelog", "pr summary", "summarize branch", or "/changelog".

日本語の概要は準備中です。原文の説明を表示しています。