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概要と使いどころ
Pattern for adding derived edge types in the Grafema Rust orchestrator (main.rs). Use when: (1) need to create new graph edges derived from existing edges (e.g., MODULE-level DEPENDS_ON from IMPORTS_FROM), (2) Datalog joins on large edge sets time out, (3) adding enrichment steps that combine data from multiple resolver outputs, (4) need to understand how resolver outputs flow through the orchestrator pipeline.
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Append a DiT-tuning round to history.yaml. DiT-side counterpart of the LLM-path accuracy_append.py; records practice.md5, inference_outputs, fp_baseline_outputs, and the scoring fields (scores / overall_score / loss_vs_baseline / is_satisfied) populated by quant-tuning-score-dit. Idempotent on practice_id.
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Review the operating health of a one-person company using lightweight metrics, bottleneck analysis, and stop-loss logic. Use when Codex needs to explain review concepts when needed, verify available outputs, ask one question at a time, present multiple bottleneck hypotheses, and write user-confirmed outputs into `opc-doc/`.
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You are an academic writing expert specializing in scholarly papers, literature reviews, research methodology, and thesis writing. You must adhere to strict academic standards in all outputs.## Core Requirements1. **Output Format**: Use Markdown exclusively for all writing outputs and always wrap the main content of your response within <ama-doc></ama-doc> tags to clearly distinguish the core i...
日本語の概要は準備中です。原文の説明を表示しています。
Protocol for agents to write structured outputs that survive session resets and are findable by the orchestrator.
日本語の概要は準備中です。原文の説明を表示しています。
Combines and synthesizes outputs from parallel DAG branches. Handles merge strategies, conflict resolution, and result formatting. Activate on 'aggregate results', 'combine outputs', 'merge branches', 'synthesize results', 'fan-in'. NOT for execution (use dag-parallel-executor) or scheduling (use dag-task-scheduler).
日本語の概要は準備中です。原文の説明を表示しています。
Marp形式プレゼンテーションの専門レビュー・評価・改善スキル。 10軸スコアリング（100点満点）で品質を定量評価し、具体的な改善コード付きで提案する。 Use when the user asks to: - Review, evaluate, or critique a Marp presentation / プレゼンをレビュー / 評価 / 添削 - Improve, polish, or upgrade existing slides / スライドを改善 / ブラッシュアップ - Check slide quality, score slides, or audit a deck / スライドの品質チェック / 採点 - "このプレゼンどう？" "スライドを見てほしい" "プレゼン資料のフィードバック" Reads .md files with Marp frontmatter, scores across 10 dimensions, and outputs a detailed review report with concrete before/after code improvements. Works as a companion to the marp-slides skill (generation → review → improvement cycle).
Canonical patterns for writing custom MSBuild targets. Only activate in MSBuild/.NET build context. USE FOR: diagnosing and fixing custom target authoring anti-patterns, reviewing MSBuild target definitions for correctness, diagnosing broken SDK target chains across files (e.g., Directory.Build.targets silently redefining SDK targets), fixing targets that replace CompileDependsOn instead of extending it with $(CompileDependsOn), fixing query targets that return stale results due to Outputs vs Returns misuse, fixing missing Inputs/Outputs causing unnecessary rebuilds, fixing missing FileWrites registration. Covers DependsOnTargets vs BeforeTargets vs AfterTargets, the Build→CoreBuild three-level pattern, hooking into the build pipeline, the $(XxxDependsOn) chain-extension pattern. DO NOT USE FOR: incremental build tuning (use incremental-build), parallelization (use build-parallelism), general anti-patterns (use msbuild-antipatterns), non-MSBuild build systems.
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Guide for optimizing MSBuild incremental builds. Only activate in MSBuild/.NET build context. USE FOR: builds slower than expected on subsequent runs, 'nothing changed but it rebuilds anyway', diagnosing why targets re-execute unnecessarily, fixing broken no-op builds. Covers 8 common causes: missing Inputs/Outputs on custom targets, volatile properties in output paths (timestamps/GUIDs), file writes outside tracked Outputs, missing FileWrites registration, glob changes, Visual Studio Fast Up-to-Date Check (FUTDC) issues. Key diagnostic: look for 'Building target completely' vs 'Skipping target' in binlog. DO NOT USE FOR: first-time build slowness (use build-perf-baseline), parallelism issues (use build-parallelism), evaluation-phase slowness (use eval-performance), non-MSBuild build systems. INVOKES: binlog MCP server tools (overview, search, target details); falls back to dotnet build /bl, binlog replay with diagnostic verbosity.
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backlog（atoms/pipeline/outputs）と skill ヘルス（usage/duration/unused）を統合分析し 1 レポートで提示する。kawai 氏型 analytics ループの起点。「次に何やる？」「atom 整理」「放置案件」「stale」「振り返り」「retro」「skill 使用統計」「unused skill」「atom-suggest」で発動。
Transform transcripts, conversations, or raw notes into shareable content — either multiple social posts OR a single long-form article. Learns style from user's published content. Handles transcripts of any length (tested up to 5500+ lines / 90+ min). Use when user: (1) provides transcript/conversation/recording and wants social content, (2) asks to "turn recording/notes into posts", (3) mentions generating content from recordings/notes, (4) needs multiple publishable pieces from single source, (5) asks to write an article from a transcript — e.g. "write an article/long-form", "organize into an article", "write up this session", "turn this talk into a blog post", "deep dive". Social mode outputs 2-15 ready-to-publish pieces. Article mode outputs a structured long-form piece (3000-10000+ chars) written section-by-section.
日本語の概要は準備中です。原文の説明を表示しています。
ToolUniverse plugin router. STEP 1 BEFORE ANY ANALYSIS: if the data folder contains `*_executed.ipynb`, run `tu run read_executed_notebook '{"data_folder":"<path>","search":"<keyword>"}'` to extract its cell outputs and apply EVERY filter/sample-exclusion the notebook used — even when the question says 'Using DESeq2/Run X/Compute Y' (this describes the METHOD the notebook used, not a request to rerun). The notebook's cell outputs are the only published authoritative answers; reimplementing or reading stale pre-computed CSVs in the data folder produces different numbers because of outlier-sample removal, library version, and filter steps you don't see by skimming. STEP 2 routing — pick a sub-skill name from this exact list (never invent): tooluniverse-rnaseq-deseq2 (RNA/miRNA-seq DE, correlation, PCA, clustering, dispersion), tooluniverse-gene-enrichment (GO/KEGG/Reactome/GSEA/pathway enrichment), tooluniverse-statistical-modeling (regression, ANOVA, ordinal/logistic, chi-square, correlation, power), tooluniverse-image-analysis (microscopy, colony, fluorescence, dose-response, .tif — including ANOVA / Dunnett / power-analysis on image-derived measurements), tooluniverse-epigenomics (DNA methylation, CpG, m6A, MeRIP-seq, bisulfite, ChIP-seq, chromatin), tooluniverse-sequence-analysis (FASTQ, Trimmomatic, BWA, samtools, coverage), tooluniverse-variant-analysis (VCF, VAF, SNP, mutation), tooluniverse-phylogenetics (treeness, PhyKIT, parsimony), tooluniverse-single-cell (scRNA, h5ad, scanpy), tooluniverse-crispr-screen-analysis (MAGeCK, sgRNA), tooluniverse-proteomics-analysis (mass spec, TMT). Use for CSV/Excel/VCF/FASTA/h5ad and any biology/chemistry/medicine analysis question.
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Authors reproducible bioinformatics pipelines with Snakemake - rules wired by output-file pattern, wildcards and expand() for sample fan-out, checkpoints for runtime-unknown outputs, resource/retry escalation, and conda/container software deployment on HPC and cloud. Use when deciding rule-based (Snakemake) vs channel/dataflow (Nextflow) authoring; wiring rules by OUTPUT-file pattern rather than imperative order; using wildcards + expand() for sample fan-out and constraining them to stop silent mis-routing; adding checkpoints when the set of outputs is unknown until a step runs (dynamic DAG); diagnosing why a job reran (or did not) under the mtime-plus-provenance trigger set; escalating memory on retry for OOM-killed jobs; and porting a Snakemake 7 `--cluster`/remote-provider command to the Snakemake 8+ executor-plugin and storage-plugin model (snakemake-executor-plugin-slurm) with `--software-deployment-method`.
日本語の概要は準備中です。原文の説明を表示しています。
Validates docked / generated protein-ligand poses using PoseBusters physical-validity tests, strain energy quantification, geometric checks (planarity, vdW overlap, bond/angle distortion), and pose-energy reasonableness. Filters AI-docking outputs (DiffDock, EquiBind, NeuralPLexer) where ~50% of poses fail physical-validity tests. Use when QC-ing docking results, comparing classical vs ML docking outputs, or filtering pose lists before SAR analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Central authority for Claude Agent SDK (TypeScript and Python SDKs). Covers SDK installation, authentication (Anthropic key, Bedrock, Vertex), sessions and resumption, forking sessions, streaming vs single mode, custom tools, permissions (allowedTools, disallowedTools, permissionMode), MCP integration, system prompts (CLAUDE.md, appendSystemPrompt, outputStyle), cost tracking, todo tracking, structured outputs, hosting patterns, plugins, and SDK branding guidelines. Assists with building custom agents, configuring SDK options, and troubleshooting SDK issues. Delegates 100% to docs-management skill for official documentation.
日本語の概要は準備中です。原文の説明を表示しています。
OpenAI API (developers.openai.com) の Responses API リファレンス。 text generation, embeddings, structured outputs, streaming, function calling, programmatic tool calling, conversation state, prompt caching, reasoning models, background mode, compaction, multi-agent。 webhooks, error codes, rate limits, Realtime API server controls。 公式 SDK (Python / JavaScript(JS) / .NET / Java / Go / Ruby), openai CLI。 Chat Completions / Assistants からの移行, deprecations。
Claude API (platform.claude.com) の Messages API リファレンス。 streaming (SSE), thinking (adaptive) / effort, prompt caching, context editing, compaction, structured outputs, Message Batches, token counting, vision / PDF, Files API, citations, embeddings (Voyage AI)。 errors, rate limits, beta headers, Amazon Bedrock / Vertex AI / Foundry 経由アクセスを含む。
Claude Agent SDK (code.claude.com/docs/en/agent-sdk) の TypeScript / Python リファレンス。 query(), ClaudeAgentOptions / Options, custom tools (in-process MCP), createSdkMcpServer, hooks, permissions (canUseTool), subagents, sessions (resume / fork), streaming, structured outputs, slash commands, tool search, hosting / observability。
Generate a single-file Chinese atelier-style portfolio website (horizontal-row list + hover-reveal thumb interaction, art lishu typography "Alimama DaoLiTi" via CDN, light/dark theme, hash-routed detail pages). Takes a natural-language description of the studio (name, director, discipline, works) and outputs ONE working .html file. Runs in BOTH Claude Code (writes to ~/Desktop) and GLM / online chat (outputs HTML inline). Trigger phrases include "做个中式工作室作品集", "做个隶书作品集", "lishu-portfolio-gen ...", "做个白屋风格的作品集", or when user drags this skill folder into chat asking for an atelier-style site.
日本語の概要は準備中です。原文の説明を表示しています。
Generate a single-file industrial-archive product landing page (Nordic museum aesthetic, hash-routed detail pages). Takes a natural-language description of one or more "exhibit-style" products (objects, tools, hardware, watches, kitchenware, lighting, audio, instruments, anything with a designed/forged/restrained quality); outputs ONE working .html file. Visitors see a black-framed cover that flips between exhibits, sidebar index, side meta column (material/origin/year/dimension), and click any exhibit → full detail page (giant italic title, spec table, hero image, lead + 3 prose paragraphs, gallery, prev/next). Runs in BOTH Claude Code (writes to ~/Desktop) and GLM / online chat (outputs HTML inline). Trigger: "做个工业风产品落地页", "做克制之物风格的展品页", "industrial-archive-gen ...", or when user drags this skill folder into chat asking for a product page in the Nordic-industrial archive style.
日本語の概要は準備中です。原文の説明を表示しています。
Generate a single-file VR-style portfolio website — works are tiled on the inside of a 3D cylinder/sphere (concave wraparound, like an immersive headset), with mouse-controlled head tilt, long-press to drag and browse the infinite canvas, click to open work detail. Includes overlays for About / CV / Contact / Filter. Takes a natural-language description of the studio and works (images + brief copy); outputs ONE working .html file. Runs in BOTH Claude Code (writes to ~/Desktop) and GLM / online chat (outputs HTML inline). Trigger phrases: "做个 VR 作品集", "做个无限画布作品集", "做个穹顶包裹的作品集", "vr-canvas-gen ...", or when user drags this skill folder into chat asking for a wraparound/immersive portfolio site.
日本語の概要は準備中です。原文の説明を表示しています。
Generate a single-file product landing page with a layered ASCII cosmos hero (rotating ASCII planet, drifting irregular asteroids, comet trails, nebula gas clouds — each in its own harmonious color) plus full marketing sections (about / features grid / showcase / spec / pricing / CTA / footer). Takes a natural-language description of one product (any kind — a note app, a coffee subscription, a CLI tool, an indie hardware, a hosting service…) and outputs ONE working .html file with deep-space dark or warm-letterpress theme. Runs in BOTH Claude Code (writes to ~/Desktop) and GLM / online chat (outputs HTML inline). Trigger phrases: "做个宇宙风产品落地页", "生成 ASCII 产品官网", "ascii-cosmos-gen ...", "做个独立软件 / 独立硬件落地页", or when user drags this skill folder into chat asking for an atmospheric product landing page.
日本語の概要は準備中です。原文の説明を表示しています。
Validates docked / generated protein-ligand poses using PoseBusters physical-validity tests, strain energy quantification, geometric checks (planarity, vdW overlap, bond/angle distortion), and pose-energy reasonableness. Filters AI-docking outputs (DiffDock, EquiBind, NeuralPLexer) where ~50% of poses fail physical-validity tests. Use when QC-ing docking results, comparing classical vs ML docking outputs, or filtering pose lists before SAR analysis.
日本語の概要は準備中です。原文の説明を表示しています。
Configure output requests - field outputs, history outputs. Use when user asks what results to save, output variables, reduce output file size, or history output.
日本語の概要は準備中です。原文の説明を表示しています。