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概要と使いどころ
Complete mass spectrometry analysis platform. Use for proteomics workflows feature detection, peptide identification, protein quantification, and complex LC-MS/MS pipelines. Supports extensive file formats and algorithms. Best for proteomics, comprehensive MS data processing. For simple spectral comparison and metabolite ID use matchms.
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Cheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure search, 2D/3D generation, similarity, reactions. For standard workflows with simpler interface, use datamol (wrapper around RDKit). Use rdkit for advanced control, custom sanitization, specialized algorithms.
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Runs the MS-DIAL preprocessing workflow (peak picking, MS2Dec spectral deconvolution, alignment, gap-filling) and imports the alignment-result table into R or Python with honest filtering. Use when preprocessing LC-MS DDA/DIA (SWATH) raw data with MS-DIAL, deciding MS-DIAL vs XCMS, configuring the MsdialConsoleApp console run, or parsing an MS-DIAL export into a clean feature matrix. For programmatic R peak detection and the feature-table-as-artifact framing see metabolomics/xcms-preprocessing; for lipid annotation mode see metabolomics/lipidomics; for MSI-level confidence honesty see metabolomics/metabolite-annotation; for drift correction and QC see metabolomics/normalization-qc.
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Implement Flutter, React Native, or native Swift apps. Use for mobile screens, widgets, platform integrations, and application data flows.
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Implement or modify web UI in React, Next.js, or Angular. Use for components, pages, styles, forms, and frontend state or data flows.
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Generate a PDF packing slip and a PNG shipping label from the same order data in a single fulfillment workflow.
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Extract parties, dates, and clauses from a contract into structured JSON for legal review workflows.
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Spawns and attaches sensors on a running CARLA server — cameras (rgb/depth/semantic/instance/optical-flow/normals), lidar, radar, IMU, GNSS, collision/lane-invasion/obstacle — to the ego or any actor, with a mount transform and blueprint attributes (resolution, fov, sensor_tick, lidar range/points, …). Also sets up native ROS 2 publishing (--ros to enable_for_ros, --ros-name/--ros-frame-id topic and TF naming) and prints the topics the sensor will publish. Use when the user asks to "add a camera/lidar/sensor", "put a dashcam on the ego", "attach a depth camera", "mount a sensor", or "publish a sensor to ROS". Prints the sensor id; read its data with the read-sensor skill.
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SQLite-based ticket tracking for structured development workflows. Use this skill when the user asks to initialize a ticket database, import requirements, list tickets, get the next ticket to work on, mark tickets as done, or check ticket status. Essential for managing epics, user stories, and acceptance criteria.
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API integration patterns for Adynato mobile apps. Covers data fetching with TanStack Query, authentication flows, offline support, error handling, and optimistic updates in React Native/Expo apps. Use when integrating APIs into mobile applications.
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Three-file state management for session continuity. Maintains STATE.md, DECISIONS.md, and PROGRESS.md as human-readable session context alongside the SQLite ticket database. Use this skill when updating workflow state, logging decisions, tracking session progress, or resuming work after a context break.
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Generates an Apple-compliant account deletion flow with multi-step confirmation UI, optional data export, configurable grace period, Keychain cleanup, and server-side deletion request. Use when user needs account deletion, right-to-delete, or Apple App Review compliance for account removal.
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Cloudflare-first platform selection. Decision trees for Workers, D1, R2, KV, DO, Queues, Vectorize, Containers, Sandboxes, Flagship, Agent Memory, Workflows v2. Default stack, override conditions, auth, data patterns, reliability.
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Execute C# with Unity APIs when existing uloop tools cannot inspect or edit enough. Use for scene, prefab, SerializedObject, AssetDatabase refresh/.meta generation, menu, or PlayMode automation.
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Unity 6 UI development guide. Use when building user interfaces, menus, HUD, buttons, or any UI elements. Covers UI Toolkit (recommended for new projects — USS, UXML, UI Builder, data binding), uGUI/Canvas (legacy runtime UI), and IMGUI. Based on Unity 6.3 LTS documentation.
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Ensure architecture diagrams are readable, consistent with text, and clear on scope, boundaries, and data flow.
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Code review checklist for SwiftUI and Swift PRs. Use when reviewing pull requests, checking code quality, verifying Swift/SwiftUI implementations, or conducting PR reviews. Provides prioritized checklist covering state management, performance, component design, data flow, async handling, UI/UX, accessibility, security, and testing.
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Build EcoSIM atmospheric greenhouse-gas forcing files by combining a historical monthly atmgas NetCDF with RCMIP/CMIP6 SSP concentration pathways. Use when Codex needs SSP245/SSP585 or other SSP atmospheric CO2, CH4, and N2O concentrations, key-year tables, or scenario NetCDF files spanning historical years through 2100 for EcoSIM or related biogeochemical forcing workflows.
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Extract EPA/NADP tDEP atmospheric deposition and NADP precipitation chemistry rasters for an AmeriFlux or EcoSIM site. Use when deriving atmospheric chemistry inputs such as NH4, NO3, SO4, Ca, or precipitation pH for EcoSIM forcing workflows.
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Clean, high-contrast enterprise design for data-driven workflows with intuitive drag-and-drop patterns and structured layouts.
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Process, parse, create, and manipulate Microsoft Word (.docx) documents programmatically using libraries like docx or mammoth.js for document generation and data extraction. Use when generating Word documents from templates, extracting text and formatting from .docx files, creating reports and invoices, parsing resumes and forms, converting Word to HTML, creating mail merge documents, or automating document workflows.
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Eng manager-mode plan review. Lock in the execution plan — architecture, data flow, diagrams, edge cases, test coverage, performance. Walks through issues interactively with opinionated recommendations. Use when asked to "review the architecture", "engineering review", or "lock in the plan". Proactively suggest when the user has a plan or design doc and is about to start coding — to catch architecture issues before implementation. (gstack) Voice triggers (speech-to-text aliases): "tech review", "technical review", "plan engineering review".
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Orchestrates legacy AEM (6.x, AMS, on-prem) to AEM as a Cloud Service migration using BPA CSV or cache, CAM/MCP target discovery, and one-pattern-per-session workflow. Use for BPA/CAM findings, Cloud Service blockers, or fixes for scheduler, ResourceChangeListener, replication, EventListener, OSGi EventHandler, DAM AssetManager, HTL data-sly-test lint. OSGi configs → Cloud Manager — scan ui.config, .cfg.json, secrets, $[secret:]/$[env:] — agent follows references/osgi-cfg-json-cloud-manager.md when prompted. Transformation steps live in the best-practices skill—read it and the right references/ modules before editing code.
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Generate Mermaid diagrams from code, architecture, or concepts. Use when you need to visualize code flow, system architecture, data relationships, state machines, sequences, class structures, or any other diagrammable concept.
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