TL;DR

12 scripts for project knowledge persistence. Decision tree: Log -> decision/feedback/skill-usage. Generate -> changelog/session-summary/handoff/growth-report. Analyze -> patterns/knowledge-graph/knowledge-index/project-genome. Maintain -> compact old context. Triggers: $changelog, $growth-report, $session-summary, $log-decision, $compact-context, $knowledge, $codex-genome.

Codex Project Memory

Activation

1. Activate after complex tasks involving architecture, design decisions, or refactors.
2. Activate on explicit $codex-project-memory or $memory.
3. Activate on explicit command $log-decision.
4. Activate on $handoff or when user asks to generate handoff context.
5. Activate on $session-summary or when user asks to summarize a coding session.
6. Activate on $analyze-patterns or "learn project style".
7. Activate on $log-feedback or "track my fix".
8. Activate on $feedback-summary for aggregated feedback recall.
9. Activate on $skill-track to record skill usage analytics.
10. Activate on $skill-report to generate skill evolution report.
11. Activate on $build-graph or "map project" to generate project knowledge graph.
12. Activate on $changelog to generate release-oriented commit summaries.
13. Activate on $growth-report to generate a developer growth report.
14. Activate on $compact-context or "clean up old sessions".
15. Activate on $codex-genome, $generate-genome, or $genome to create layered project context docs.
16. Activate on $knowledge, "make tacit knowledge visible", or "build knowledge index" to generate .codex/knowledge/INDEX.md, .codex/knowledge/index.json, and .codex/knowledge/knowledge-graph.json. Pass --html only when an interactive dashboard is needed.
17. Activate on "memory status", "validate project memory", or before CLI/tool-harness handoff to run scripts/memory_status.py against generated artifacts.

Decision Tree Routing

User intent -> Memory action?
    |- Log/record -> What?
    |   |- Decision -> decision_logger.py
    |   |- Feedback -> track_feedback.py
    |   `- Skill usage -> track_skill_usage.py
    |
    |- Generate/export -> What?
    |   |- Handoff -> generate_handoff.py
    |   |- Session recap -> generate_session_summary.py
    |   |- Changelog -> generate_changelog.py
    |   `- Growth report -> generate_growth_report.py
    |
    |- Analyze -> What?
    |   |- Patterns -> analyze_patterns.py
    |   |- Dependencies -> build_knowledge_graph.py
    |   |- Tacit knowledge index -> build_knowledge_index.py
    |   `- Context genome -> generate_genome.py
    |
    |- Maintain -> What?
    |   `- Compact old memory -> compact_context.py
    |
    `- Not memory -> skip

Rules

• Use the decision tree to choose one memory action before invoking scripts.
• Run --help before invoking helper scripts and treat them as black-box tools unless customization or bug fixing is required.
• Review existing files in .codex/decisions/ before logging a similar technical choice.
• Use the default output paths and chaining guidance from references/behavior-guide.md unless the user requests overrides.
• Return the created path plus the headline metrics from each script JSON payload.
• See skills/.system/REGISTRY.md for full script paths.

Reference Files

• references/decision-journal-spec.md: decision logging criteria and naming conventions.
• references/handoff-spec.md: handoff usage guidance.
• references/session-summary-spec.md: session summary workflow and retention guidance.
• references/changelog-spec.md: release-focused changelog generation rules.
• references/growth-report-spec.md: developer growth analytics and reporting behavior.
• references/pattern-learner-spec.md: project style learning behavior.
• references/feedback-tracker-spec.md: feedback logging and aggregate usage.
• references/skill-evolution-spec.md: skill usage analytics and optimization.
• references/knowledge-graph-spec.md: deep architecture mapping and refresh guidance.
• build_knowledge_index.py: schema-versioned project knowledge index from genome, role docs, decisions, commits, config, and the structural knowledge graph; redacts secret-like values, stores provenance/confidence and a source fingerprint for staleness checks; --html optionally adds an offline interactive dashboard.
• references/knowledge-index.schema.json: output contract for .codex/knowledge/index.json.
• references/knowledge-graph.schema.json: output contract for .codex/knowledge/knowledge-graph.json and .codex/knowledge-graph.json.
• references/context-compactor-spec.md: retention policy, archive layout, and dry-run expectations.
• references/behavior-guide.md: detailed per-script behaviors, defaults, and chaining guidance.
• references/script-commands.md
• references/output-schemas.md
• references/project-memory-tools.json: machine-readable tool manifest for CLI/MCP-style harness generation.
• references/project-memory-tools.schema.json: schema for the tool manifest.
• references/ci-readiness.md: release gate commands, strict mode, and Windows symlink deselection.
• references/scale-sla.md: scale tiers, run_scale_gate.py report, and CI workflow mapping for large codebases.
• references/artifact-lifecycle-policy.md: hybrid commit policy for schemas vs generated .codex/ artifacts.