Deps upgrade

Contract

Field	Bound contract
Trigger	CVE remediation, major upstream release, compatibility-forced sweep, scheduled dependency hygiene, pre-release lockfile audit, or a cadence-driven or vulnerability-triggered dependency sweep.
Authority	Reversible local: writes only manifests, lockfiles, and compatibility code in the current repository (concern-atomic local commits) plus a temporary lockfile snapshot outside the tree for the pre/post audit; rollback is version control (revert the campaign commits or reset to the recorded pre-campaign HEAD). No remote mutation.
Side effect	Updates local manifests, lockfiles, and compatibility code; creates concern-atomic local commits. No feature work, no refactors beyond compatibility code, no silent lockfile drift.
Done	Selected upgrades are locked, tested at the required depth, migration guidance applied for majors, license/SBOM churn checked, and the final vulnerability scan is recorded. For a sweep, each update is classified on the risk ladder and verified, or deferred with a recorded reason.

Inputs

Must be supplied: a working repository with VCS history; toolchains for each in-scope ecosystem; and operator scope directives: which ecosystems and paths are in scope, the highest tier allowed (patch, minor, or major), and any package allowlist/blocklist. Optional: pinned target versions for specific majors, a CVE scanner choice (defaults to the ecosystem canonical scanner below), a vulnerability report or advisory feed naming affected dependencies, a cadence schedule, and freeze-window or deadline constraints that cap the tier ceiling. A major bump requires explicit human approval supplied at runtime. Before the first mutation, verify each required tool exists (command -v) and run the full test suite on the clean tree as the baseline; missing tools or a red baseline stop the run before anything changes.

Procedure

1. Gate (no mutation yet): stop without changing anything if any holds: active feature branch with high churn; pre-release freeze window; mid-incident; the task is an API-break-driven refactor rather than a dependency upgrade. Report which gate tripped. Done when: all gates pass or the tripped gate is reported without mutation.

2. Bound scope: fix from the operator directives the ecosystem list, path scope, tier ceiling, and allowlist/blocklist. Never widen during the run; findings outside scope become report items, not work. Done when: all scope fields are frozen.

3. Baseline: record the pre-campaign HEAD sha and snapshot every lockfile to a temporary directory; this snapshot is the audit baseline and the rollback anchor. Done when: the HEAD and every lockfile snapshot are recorded.

4. Inventory: enumerate manifests and lockfiles across the in-scope ecosystems. Canonical names are often extensionless (go.mod, Gemfile, pom.xml), so filter on filenames, not extensions; fd takes one glob per call, so anchor on canonical filenames with one regex:

   fd -t f '^(package(-lock)?\.json|pnpm-lock\.yaml|yarn\.lock|Cargo\.(toml|lock)|pyproject\.toml|poetry\.lock|requirements.*\.txt|Pipfile\.lock|go\.(mod|sum)|pom\.xml|build\.gradle(\.kts)?|settings\.gradle(\.kts)?|libs\.versions\.toml|gradle\.lockfile|Gemfile(\.lock)?|.*\.gemspec|.*\.opam|dune-project|opam\.locked|mix\.(exs|lock)|composer\.(json|lock))$'
   

   Add ecosystem-specific names the project uses beyond this list (Pipfile, Brewfile, flake.nix, shard.yml, pubspec.yaml). Done when: every in-scope manifest and lockfile is inventoried.

5. Scan outdated with the per-family commands and capture each report (read reports and later CHANGELOGs with bat -P -p -n, never cat):

   Family	Outdated scan	Upgrade command	Lockfile
   Rust	cargo outdated, cargo audit	cargo update, cargo upgrade	Cargo.lock
   Python (Poetry)	poetry show --outdated	poetry update, poetry add <pkg>@latest	poetry.lock
   Python (pip-tools)	pip list --outdated, pip-audit	pip-compile --upgrade, pip-sync	requirements.txt
   JavaScript/TypeScript (pnpm)	pnpm outdated, pnpm audit	pnpm update, pnpm up --latest	pnpm-lock.yaml
   JavaScript/TypeScript (npm)	npm outdated, npm audit	npm update, ncu -u	package-lock.json
   Go	go list -u -m all, govulncheck	go get -u <pkg>@latest, go mod tidy	go.sum
   Java/Kotlin (Gradle)	gradle dependencyUpdates	edit libs.versions.toml, gradle dependencies --refresh-dependencies	gradle.lockfile
   Java/Kotlin (Maven)	mvn versions:display-dependency-updates	mvn versions:use-latest-releases	pom.xml
   OCaml	opam list --upgradable	opam upgrade <pkg>, opam pin <pkg>.<ver>	*.opam.locked

   A family whose scan tool is missing is excluded from scope and reported. Tooling mandates for the whole run: fd (not find), difft (not diff), bat -P -p -n (not cat), git grep -n -F (not plain grep). Done when: each included family has a captured outdated and advisory report, and exclusions are recorded.

6. Categorize: bin every candidate as patch, minor, or major against the tier ceiling; candidates above the ceiling are reported only. Done when: every candidate has a tier and in-scope or report-only disposition.

7. Patch batch: bump all patches at once; confirm the diff is lockfile-only; run the full test suite; commit everything including the lockfile diffs as chore(deps): patch sweep. Floating ranges that skip the lockfile commit create non-reproducible builds; the lockfile diff is always committed. Done when: the patch batch is committed with a green full suite or reverted.

8. Minor batch: bump minors together; read each minor's CHANGELOG; run a smoke test (minors can shift behavior); commit as chore(deps): minor sweep. Done when: the minor batch is committed with changelogs reviewed and smoke test green, or reverted.

9. Major, one per commit. For each major bump, before writing any code:

   • Read the upstream CHANGELOG.md / MIGRATION.md / release notes; a major bump without primary-source review is forbidden.
   • Identify removed, renamed, behavior-changed, and default-changed APIs.
   • Check for an upstream-supplied codemod or migration tool and prefer it.
   • Search direct usage of each changed API with git grep -n -F '<symbol>' and ast-grep -p '<pattern>'.
   • Verify the peer-dependency and runtime-version compatibility matrix.
   • Verify the license has not changed in a blocking direction.
   • Verify the SBOM diff will match the expected dependency-tree change.

   Then apply the migration guidance (codemod or manual edits, confined to compatibility code), run the full suite plus adversarial tests with deprecation warnings enabled as errors, validate any hot path with hyperfine against the previous commit, and commit chore(deps)!: bump <pkg> <old>→<new>. Never disable deprecation or audit signals to make a gate pass; a warning that cannot be fixed now is recorded as follow-up debt. Done when: each major is one green commit with migration, compatibility, license, SBOM, and performance evidence.

10. Lockfile audit: compare the pre- and post-campaign snapshots with difft (never diff; lockfiles are machine-generated and coarser diffs misread them). Check transitive churn: surface dependencies can look clean while a transitive bump carries the CVE fix, or a new transitive CVE. Done when: expected and unexpected transitive churn are recorded.

11. Re-scan: run the CVE scanner again post-upgrade (cargo audit, pip-audit, pnpm audit / npm audit, govulncheck, per family). Read the output and record it; auto-fix flags that bypass reading (npm audit fix --force) are forbidden. Done when: every included family has recorded post-upgrade scan results.

12. Sweep disposition: for a cadence-driven or vulnerability-triggered sweep, record each update's classification, verification result, or deferral reason in the sweep report. Every update has one disposition. Done when: every update has one disposition.

13. Stop at the boundary: a major whose migration requires API-break propagation across the codebase beyond compatibility code is not started: it is reported. New CVEs surfaced by the re-scan are recorded, not remediated, inside this campaign. Done when: boundary-crossing majors and newly surfaced CVEs are report items, not campaign work.

Failure and recovery

• Gate refusal (step 1): no mutation; report the tripped gate and stop.
• Red baseline (inputs validation): no mutation; report the pre-existing failures and stop; upgrade results would not be attributable.
• Test failure in the patch or minor batch: restore the last green state (git revert the batch commit if committed, otherwise git restore the touched paths), then re-run the batch one package at a time to isolate the offender, or drop that package and record it. Never leave a partial bin failing or uncommitted.
• Major bump failure: revert the major's commit and record the blocked package with its migration blockers. A missing upstream migration guide or a failing codemod is the same outcome: revert and record; do not improvise an unreviewed migration.
• Major bump without explicit approval: do not apply; defer it with a recorded reason.
• Missing tooling: a family without its scan or upgrade tool is excluded and reported; a missing CVE scanner is fatal: the done predicate requires the final scan, so the run is blocked, never done with the scan skipped.
• Unavailable checks (test suite cannot run): defer every unverified update as non-converged with a recorded reason; do not claim the done predicate holds.
• Partial-result rule: every committed bin is a green, self-consistent state, so recovery always lands on a bin boundary; operator work outside campaign commits is never discarded. Applied and verified updates stand; failed and deferred updates are recorded.
• Blocked result: report blocked with the failing gate, the SHA reverted to, and the remaining unprocessed candidates.

Output

A terminal done or blocked upgrade report with sections in order: concern-atomic commits, per-package tiers and versions, checks per bin, major migration notes, license and SBOM churn, lockfile audit, post-upgrade CVE scans, sweep dispositions, follow-up items. The working tree contains only verified updates; deferred majors are not applied.